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DigitalSlideArchive
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HistomicsTK
A Python toolkit for pathology image analysis algorithms.
https://digitalslidearchive.github.io/HistomicsTK/
Apache License 2.0
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Bump pypa/cibuildwheel from 2.21.3 to 2.22.0
#1148
dependabot[bot]
closed
11 hours ago
0
Clean up a variety of warnings and deprecations.
#1147
manthey
closed
1 week ago
0
Drop Python 3.8
#1146
manthey
closed
1 week ago
0
Fix working with latest dask
#1145
manthey
opened
1 week ago
2
Pin dask so CI passes
#1144
manthey
closed
1 week ago
0
Update boundary detection in FSD feature extraction
#1143
FattanePourakpour
opened
3 weeks ago
3
Update README
#1142
manthey
closed
1 month ago
0
Remove install of bokeh from dockerfile
#1141
manthey
closed
1 month ago
0
Fix an issue with numpy 2.
#1140
manthey
closed
1 month ago
0
Logical error in function compute_fsd_features
#1139
name-used
opened
1 month ago
7
Test that CLIs emit no warnings
#1138
manthey
closed
1 month ago
0
Bump pypa/cibuildwheel from 2.21.2 to 2.21.3
#1137
dependabot[bot]
closed
1 month ago
0
Bump python from 3.12-slim to 3.13-slim
#1136
dependabot[bot]
opened
1 month ago
0
Fix sphinx builds
#1135
manthey
closed
1 month ago
0
Bump pypa/cibuildwheel from 2.21.1 to 2.21.2
#1134
dependabot[bot]
closed
1 month ago
3
Bump pypa/cibuildwheel from 2.21.0 to 2.21.1
#1133
dependabot[bot]
closed
2 months ago
0
Make color deconvolution annotation optional
#1132
manthey
closed
2 months ago
0
Remove 'vectorized' from the shapely dependency.
#1131
manthey
closed
2 months ago
0
Remove 'vectorized' from the shapely dependency.
#1130
manthey
closed
2 months ago
0
Bump pypa/cibuildwheel from 2.20.0 to 2.21.0
#1129
dependabot[bot]
closed
2 months ago
0
Error occurred while using Docker for build
#1128
XmySz
opened
2 months ago
3
New error when trying to pip install HistomicsTK - rasterio failing
#1127
pearcetm
closed
2 months ago
5
Remove some pre python 3.8 fallback code
#1126
manthey
closed
3 months ago
0
Use rdfind to make the docker image slightly smaller
#1125
manthey
closed
3 months ago
0
Speed up listing xml for clis
#1124
manthey
closed
3 months ago
0
Bump pypa/cibuildwheel from 2.19.2 to 2.20.0
#1123
dependabot[bot]
closed
3 months ago
0
Harden haralick computation.
#1122
manthey
closed
3 months ago
0
Optionally add properties to polygon elements
#1121
manthey
closed
4 months ago
0
Bump pypa/cibuildwheel from 2.19.1 to 2.19.2
#1120
dependabot[bot]
closed
4 months ago
0
Fix the name of a centroid feature
#1119
manthey
closed
4 months ago
0
histomicstk.features.compute_nuclei_features output column name 'Identifier.Centroid' is wrong
#1118
Bejsernia
closed
4 months ago
1
Update ruff command in tox
#1117
manthey
closed
4 months ago
0
calculation error while computing haralick features for a set of images
#1116
me-nobody
closed
3 months ago
1
Bump pypa/cibuildwheel from 2.18.1 to 2.19.1
#1115
dependabot[bot]
closed
5 months ago
0
histomics wheels can't be found at https://girder.github.io/large_image_wheels any more
#1114
iRyoka
closed
5 months ago
2
Bump pypa/cibuildwheel from 2.18.0 to 2.18.1
#1113
dependabot[bot]
closed
5 months ago
0
fix: redundant writes to dataframe #1105 (#1106)
#1112
manthey
closed
6 months ago
0
Bump pypa/cibuildwheel from 2.17.0 to 2.18.0
#1111
dependabot[bot]
closed
6 months ago
0
Update tests to handle variations in upstream libraries
#1110
manthey
closed
7 months ago
0
Add the large_image_converter to requirements
#1109
manthey
closed
7 months ago
0
Update precommit versions and remove some needless items from setup.py
#1108
manthey
closed
7 months ago
0
946 compute haralick features works incorrectly when im intensity is a float with 0 1 values
#1107
cooperlab
closed
7 months ago
0
fix: redundant writes to dataframe #1105
#1106
X-TRON404
closed
6 months ago
1
Remove redundant access to DataFrame
#1105
X-TRON404
closed
6 months ago
0
Bump pypa/cibuildwheel from 2.16.5 to 2.17.0
#1104
dependabot[bot]
closed
8 months ago
0
Fix some typos
#1103
manthey
closed
9 months ago
0
Add a console entry point.
#1102
manthey
closed
9 months ago
0
Fix divide zero guard
#1101
manthey
closed
9 months ago
0
Nuclei detection should be more stable across regions
#1100
manthey
closed
9 months ago
0
Guard against division by zero
#1099
manthey
closed
9 months ago
0
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