Closed Biomiha closed 3 years ago
@Biomiha, looks like I assumed that users would not change the colour scale when setting back_gate = TRUE
as the points in the base layer would be concealed by overlays (making the colour scale irrelevant). Nevertheless, I pushed a temporary fix to the master
branch for you:
devtools::install_github("DillonHammill/CytoExploreR')
Thanks @DillonHammill. I think that's a reasonable assumption. What happened was that I set the theme at the beginning of the script to obviously include all subsequent plots and I plotted the gating scheme after I'd done all the gating. Thanks for the fix.
Hi @DillonHammill,
I've noticed that if I set a personalised theme for plotting in CytoExplorereR, i.e.:
I get the following error if I want to plot the gating scheme with
back_gate = TRUE
:No issues plotting this out if
cyto_plot_theme
is not set. I imagine there is a call topoint_cols
fromcyto_plot_gating_scheme
that gets overridden by the new theme.Thanks.