shiny yeti theme error - Githubissues

rwbaer commented 2 years ago

Briefly describe what you hope to achieve: I'm trying to create a gating set with code that I'm pretty sure has worked in the past. Something seems to have changed with shiny themes, but I was not even aware that we were using shiny themes. Any insights on how to precede? This happens on at least two different installations

Outline the steps taken to attempt to reach this goal (paste code below):

Include all data preparation steps where appropriate.


> library(CytoExploreR)
> gsSamp <- cyto_setup(path = "Samples",

gatingTemplate = "Samples-Template.csv",
details = "Samples-Details.csv",
restrict = TRUE) Loading FCS files into a GatingSet... Assigning markers to channels... Error in shinytheme("yeti") : yeti is not an available theme. Valid themes are: .

Include any associated screenshots or images here:

DillonHammill commented 2 years ago

Please update your DataEditR package:

install.packages("DataEditR")

I just realised I haven't fixed this in cyto_spillover_edit() too, I will get onto that today.

rwbaer commented 2 years ago

This alone did not seem to solve it. I'm showing version 0.1.5 for DataEditR, if that is helpful.

Same error as before and the list available themes is still just a dot, ".".

DillonHammill commented 2 years ago

Oh yeah, sorry I forgot that the current version doesn't use DataEditR yet. I will push a fix soon.

DillonHammill commented 2 years ago

@rwbaer I just pushed a fix to master. You will also need to install the bslib package which replaces shinythemes.

install.packages("bslib")
devtools::install_github("DillonHammill/CytoExploreR")

rwbaer commented 2 years ago

@DillonHammill thanks we seem to be back up and running again.

DillonHammill / CytoExploreR

shiny yeti theme error #137