cyto_setup details argument

Describe the bug During cyto_setup(), I tried to place "sample details" one folder layer up from where the script code (project directory) was set. In terms of writing a sample-details.csv file this seems to work fine, but if "sample-details.csv" already existis cyto_setup() seems to not find it and pre-populate the columns with existing values.

To Reproduce This code did not work to repopulate when "../FCSSamples-Details.csv" already exists

gsSamp <- cyto_setup(path = "../Samples",
                     gatingTemplate = "../FCSVersion-Template.csv",
                     details = "../FCSSamples-Details.csv",
                     restrict = TRUE)

Expected behavior I expect this to find an exiting "FCSSamples-Details.csv" in the parent directory if one exists, but instead it just has a single column containing the filelist from ../Samples. If I hit Save it writes over the existing "../FCSSamples-Details.csv", so the problem seems confined just to the read portion of the operation.

Desktop (please complete the following information): Windows 11 platform x86_64-w64-mingw32
arch x86_64
os mingw32
crt ucrt
system x86_64, mingw32
status
major 4
minor 2.3
year 2023
month 03
day 15
svn rev 83980
language R
version.string R version 4.2.3 (2023-03-15 ucrt) nickname Shortstop Beagle

Additional context Add any other context about the problem here.

DillonHammill / CytoExploreR

cyto_setup details argument #183