Is it possible to declare multiple CRAM files?

DiltheyLab / HLA-LA

Fast HLA type inference from whole-genome data

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Is it possible to declare multiple CRAM files? #66

Closed kantale closed 1 year ago

kantale commented 2 years ago

Hi,

I am trying to process EGAF CRAM Files from EGA. A single sample might contain multiple CRAM files (8) and each file is ~4GB. Do I have to merge these files in a single CRAM, or is it possible to declare multiple CRAM files in a single run?

AlexanderDilthey commented 1 year ago

Hi @kantale,

You have to merge them beforehand.

Best,

Alex