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DiltheyLab / HLA-LA

Fast HLA type inference from whole-genome data
GNU General Public License v3.0
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I need samtools >=1.3 #86

Open dennis-serum opened 1 year ago

dennis-serum commented 1 year ago

I am attempting to run HLA-LA.pl and I get "I need samtools >=1.3" error. However, I have samtools 1.16.1 installed and it is in the correct identified path above this error.

AlexanderDilthey commented 11 months ago

Could you double-check that the 1.16.1 version of samtools is the one used by HLA*LA? (I.e., there is no other samtools specified in the file paths.ini)? Could you post the output of samtools --version?

bsb2014 commented 7 months ago

See #57