Discngine / fpocket

fpocket is a very fast open source protein pocket detection algorithm based on Voronoi tessellation. The platform is suited for the scientific community willing to develop new scoring functions and extract pocket descriptors on a large scale level. fpocket is distributed as free open source software. If you are interested in integrating fpocket in an industrial setting and require official support, please contact Discngine (www.discngine.com).
MIT License
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fpocket fails to run on a mmcif file with customized fields #119

Closed PeyratG closed 6 months ago

PeyratG commented 7 months ago

Describe the bug When I add custom fields to an mmcif file, fpocket is not able to discover pockets anymore (it was able to discover pockets in the mmcif file downloaded from the PDB: 4gfo)

To Reproduce Steps to reproduce the behavior:

  1. Run fpocket on the attached file 4gfo_customized.cif.gz

Expected behavior Detect pockets

Desktop (please complete the following information):

pschmidtke commented 6 months ago

fixed with https://github.com/Discngine/fpocket/pull/121