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New Term Request: Metabolic encephalomyopathic crises, recurrent, with rhabdomyolysis, cardiac arrhythmias, and neurodegeneration, -or- TANGO2 related disease (name TBD?) #1141

Closed vjenkinsFB closed 1 year ago

vjenkinsFB commented 1 year ago

I'd like to request a term for Metabolic encephalomyopathic crises, recurrent, with rhabdomyolysis, cardiac arrhythmias, and neurodegeneration, a.k.a. TANGO2 related disease.

The name for this is a mess. There are several different names used by different sites. Many papers just call it something with TANGO2 in the name. I will leave this issue up to you.

OMIM: “Metabolic encephalomyopathic crises, recurrent, with rhabdomyolysis, cardiac arrhythmias, and neurodegeneration”, https://omim.org/entry/616878

Potential definition: [[NAME]] has_material_basis_in homozygous or compound heterozygous mutation in the TANGO2 gene on chromosome 22q11.

Potential parent term: inherited metabolic disorder

Synonyms: MECRCN, TANGO2 related disease, TANGO2 deficiency, recurrent metabolic encephalomyopathic crises-rhabdomyolysis-cardiac arrhythmia-intellectual disability syndrome, metabolic crises with rhabdomyolysis, cardiac arrhythmias, and neurodegeneration, TANGO2-related metabolic encephalopathy and arrhythmias

ClinVar search term: tango2[gene] AND (((1001[VARLEN] : 300000000[VARLEN] AND "single gene"[Properties]) OR (1[VARLEN] : 1000[VARLEN] AND "single gene"[Properties]))) , all except for one instance points to…

MedGen page(s) pointed to by the above: “Recurrent metabolic encephalomyopathic crises-rhabdomyolysis-cardiac arrhythmia-intellectual disability syndrome” (https://www.ncbi.nlm.nih.gov/medgen/C5567524/).

GeneReviews page: “TANGO2 deficiency”, https://www.ncbi.nlm.nih.gov/books/NBK476443/

MalaCards page: “Tango2-Related Metabolic Encephalopathy and Arrhythmias”, https://www.malacards.org/card/tango2_related_metabolic_encephalopathy_and_arrhythmias

RareDiseases.org: “TANGO2-Related Metabolic Encephalopathy and Arrhythmias”, https://rarediseases.org/gard-rare-disease/tango2-related-metabolic-encephalopathy-and-arrhythmias/

Orphanet: “Recurrent metabolic encephalomyopathic crises-rhabdomyolysis-cardiac arrhythmia-intellectual disability syndrome”, https://www.orpha.net/consor/cgi-bin/OC_Exp.php?lng=en&Expert=480864

HGNC entry for gene: https://www.genenames.org/data/gene-symbol-report/#!/hgnc_id/HGNC:25439

Selected citations other than those in the OMIM entry (this is a very active field):

Other links: https://tango2research.org/, which calls it TANGO2 related disease

FlyBase paper(s) to curate with this term: PMID: 36502486, FBrf0255990

My contact info: vjenkins@morgan.harvard.edu (FlyBase), 0000-0002-1567-7626. Thank you!

lschriml commented 1 year ago

Thank you for the new term request, it will be added in the April release. Cheers, Lynn

SianGramates commented 1 year ago

Hi Lynn, I'm making a FlyBase human disease model report for this disease, and am wondering on what you settled on as a DO term for it (I don't need the DOID yet, but would to name the report).

lschriml commented 1 year ago

Apologies on the delay with your request. We used the OMIM name, metabolic encephalomyopathic crises, recurrent, with rhabdomyolysis, cardiac arrhythmias, and neurodegeneration

This disease has been added to DO.

Cheers, Lynn

SianGramates commented 1 year ago

Thanks Lynn. FlyBase went in the other direction, and have named our Human Disease Model 'TANGO2-related metabolic encephalopathy and arrythmias' (FBhh0001522).

lschriml commented 1 year ago

Yours is a better name, I have switched to your name.