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Repository for the Human Disease Ontology.
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New Term Request: Sorbitol dehydrogenase deficiency with peripheral neuropathy #1168

Closed vjenkinsFB closed 1 year ago

vjenkinsFB commented 1 year ago

I'd like to request a term for sorbitol dehydrogenase deficiency with peripheral neuropathy. It has some overlap with Charcot-Marie-Tooth, and may be considered a subtype of CMT, you’ll need to decide that.

OMIM: https://omim.org/entry/618912

Potential definition: Sorbitol dehydrogenase deficiency with peripheral neuropathy has_material_basis_in homozygous or compound heterozygous mutation in the SORD gene on chromosome 15q21.

Potential parent term: neuropathy, Charcot-Marie-Tooth?

Synonyms: SORDD, SORD-associated CMT neuropathy, distal hereditary motor neuropathy

ClinVar search term: SORD AND ( ( ("clinsig pathogenic"[Properties] or "clinsig pathogenic low penetrance"[Properties] or "clinsig established risk allele"[Properties]) OR ("clinsig likely pathogenic"[Properties] or "clinsig likely pathogenic low penetrance"[Properties] or "clinsig likely risk allele"[Properties]) OR ("clinsig vus"[Properties] or "clinsig uncertain risk allele"[Properties]) OR ("clinsig has conflicts"[Properties]) ) AND (1[VARLEN]:1000[VARLEN] AND "single gene"[Properties]))

MedGen page(s) pointed to by the above: https://www.ncbi.nlm.nih.gov/medgen/C5394466/

MalaCards page: https://www.malacards.org/card/sorbitol_dehydrogenase_deficiency_with_peripheral_neuropathy

HGNC entry for gene: https://www.genenames.org/data/gene-symbol-report/#!/hgnc_id/11184

Citations other than those in the OMIM entry:

FlyBase paper(s) to curate with this term: FBrf0245621

My contact info: vjenkins@morgan.harvard.edu (FlyBase), 0000-0002-1567-7626. Thank you!

csbjohnson commented 1 year ago

Thank you very much for your term request for sorbitol dehydrogenase deficiency with peripheral neuropathy, @vjenkinsFB.

We'll review it, get back to you soon and update the DO for the next release.

lschriml commented 1 year ago

adding this new term as a child of neuromuscular disease, a sibling term to Charcot-Marie-Tooth

lschriml commented 1 year ago

done

allenbaron commented 1 year ago

This disease was accidentally added in the June 2023 release (v2023-06-29) with a duplicate IRI (http://purl.obolibrary.org/obo/DOID_0080025) matching a historically obsoleted disease, and this error persisted in the July releases (v2023-07-20 & v2023-07-24). We have deleted that IRI and re-created the disease with a new, unique IRI (http://purl.obolibrary.org/obo/DOID_0081376) in the latest release v2023-08-08. If you have used this disease with DOID:0080025, please update to DOID:0081376.

We apologize for any inconvenience this may cause.

@vjenkinsFB