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NTR: diphthamide deficiency syndrome #1239

Closed srengel closed 8 months ago

srengel commented 9 months ago

Include:

NTR: diphthamide deficiency syndrome

Autosomal recessive diphthamide deficiency syndrome presents as intellectual disability with developmental abnormalities, seizures, craniofacial and additional morphological phenotypes. It is caused by reduced activity of proteins that synthesize diphthamide on human translation elongation factor 2. Diphthamide synthesis requires seven proteins (DPH1-DPH7) with clinical deficiency described for DPH1, DPH2 and DPH5.

https://pubmed.ncbi.nlm.nih.gov/37675463/

trying to annotate the yeast orthologs at SGD https://www.yeastgenome.org/reference/S000345302

Stacia Engel, SGD www.yeastgenome.org 0000-0001-5472-917X

allenbaron commented 9 months ago

Stacia, thanks for requesting this. Three diphthamide deficiency syndrome diseases will be in the next release (linked to mutations in the DPH1, DPH2 & DPH5 genes).

Thanks for the great work you're doing at SGD. My apologies for the delayed response.

allenbaron commented 8 months ago

Because dipthamide is an amino acid and this disease is caused by disruption of a metabolic process (post-translation modification of histidine to dipthamide), 'dipthamide deficiency syndrome' will be classified as an 'amino acid metabolic disorder' (DOID:9252).

dipthamide structure (from Wikipedia)

Screenshot 2023-10-10 at 3 05 44 PM