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Cowden syndrome, OMIM:PS158350 and Bannayan-Riley-Ruvalcaba syndrome #971

Closed jrsjrs closed 3 years ago

jrsjrs commented 3 years ago

It would be very helpful if Cowden syndrome (DOID:6457) could be expanded to match the OMIM phenotypic series OMIM:PS158350 (https://www.omim.org/phenotypicSeries/PS158350) and if the relationship of that series to Bannayan-Riley-Ruvalcaba syndrome (BRRS, DOID:0050657) could be clarified. As you know, OMIM has merged BRRS with their single entry COWDEN SYNDROME 1; CWS1 (#158350) and made it one of the members of PS158350, versus the fact the DO has only two terms, Bannayan-Riley-Ruvalcaba syndrome (DOID:0050657) and Cowden syndrome (DOID:6457), which have no relationship other than sharing two high-level parent terms (syndrome and sutosomal dominant disease). Thank you!

lschriml commented 3 years ago

Thank you for submitting this review !! The name changes, lumping and splitting makes this one rather complicated.

Reviewing OMIM, and recent literature, I am going to revise the classification of these syndromes as:

[parent term] PTEN hamartoma tumor syndrome [DOID:0080191] OMIM: PS158350 https://rarediseases.info.nih.gov/diseases/12800/index

[child terms]

and Cowden syndrome [DOID:6457]
xrefs:
GARD:6202. - Cowden syndrome MESH:D006223
Hamartoma Syndrome, Multiple - includes: Bannayan-Zonana Syndrome and Cowden Disease NCI:C3076 - Cowden syndrome NCI:C8419. - Dysplastic Cerebellar Gangliocytoma (Lhermitte-Duclos Disease)

              ORDO:201. Cowden syndrome
                          SNOMEDCT_US_2020_09_01:58037000   Cowden syndrome
                         SNOMEDCT_US_2020_09_01:67944007          Lhermitte-Duclos Disease
                         UMLS_CUI:C0018553
                        UMLS_CUI:C0391826

  [child terms of Cowden syndrome]
       Bannayan-Riley-Ruvalcaba syndrome   (BRRS,  DOID:0050657) - OMIM:158350
            synonym = Cowden syndrome 1
                    Cowden syndrome-1 (CWS1) is caused by heterozygous germline mutation in the PTEN gene 
                   on chromosome 10q23.

     **Cowden syndrome subtypes ( 4, 5, 6,7)**

OMIM:615107 Cowden syndrome 4.
OMIM:615108 Cowden syndrome 5 OMIM:615109 Cowden syndrome 6 OMIM:616858 Cowden syndrome 7. AD

==================================================== Notes: Cowden syndrome (DOID:6457) A syndrome characterized by multiple noncancerous, tumor-like growths (hamartomas) and an increased risk of certain forms of cancer, especially breast, thyroid and endometrium. OMIM: PS158350

OMIM:158350 Cowden syndrome 1 AD in OMIM also: Lhermitte-Duclos syndrome --> OMIM. includes Bannayan-Riley-Ruvalcaba syndrome (BRRS)
as a synonym of Cowden syndrome 1, 4, 5,6,7

Cowden syndrome-1 is a hamartomatous disorder characterized by macrocephaly, facial trichilemmomas, acral keratoses, papillomatous papules, and an increased risk for the development of breast, thyroid, and endometrial carcinoma. Bannayan-Riley-Ruvalcaba syndrome (BRRS), previously thought be distinct, shared clinical characteristics with Cowden syndrome, such as hamartomatous polyps of the gastrointestinal tract, mucocutaneous lesions, and increased risk of developing neoplasms, but had the additional features of developmental delay, macrocephaly, lipomas, hemangiomas, and pigmented speckled macules of the glans penis in males. Because features of BRRS and Cowden syndrome have been found in individuals within the same family with the same PTEN mutation, Cowden syndrome-1 and BRRS are considered to be the same disorder with variable expression and age-related penetrance.

https://pubmed.ncbi.nlm.nih.gov/18781191/

Genetics Home Reference: https://medlineplus.gov/genetics/condition/bannayan-riley-ruvalcaba-syndrome/ Based on these similarities, researchers have proposed that Bannayan-Riley-Ruvalcaba syndrome and Cowden syndrome represent a spectrum of overlapping features known as PTEN hamartoma tumor syndrome instead of two distinct conditions.

see: DOID:0080191 PTEN hamartoma tumor syndrome

A syndrome characterized as a spectrum of disorders (Cowden syndrome, Bannayan-Riley-Ruvalcaba syndrome, PTEN-related Proteus syndrome, and Proteus-like syndrome) caused by germline mutations of the PTEN gene.

[https://pubmed.ncbi.nlm.nih.gov/31609537/] PHTS incorporates a number of historical clinical presentations including Bannayan-Riley-Ruvalcaba syndrome, Cowden syndrome, and a macrocephaly-autism/developmental delay syndrome.

in OMIM: Bannayan-Riley-Ruvalcaba syndrome (BRRS, DOID:0050657) A syndrome that is characterized by macrocephaly, multiple noncancerous tumors and hamartomas, and dark freckles on the penis, and has_material_basis_in heterozygous germline mutation in the PTEN gene on chromosome 10q23.