bin/bitstomach.sh -s ../aspire/aspire-spek.json --data ../aspire/mpog-munged.csv -a ../aspire/annotations.r -o /tmp
This call succeeds:
bin/bitstomach.sh -s ../aspire/aspire-spek.json --data ../aspire/mpog-munged.csv -a ../aspire/annotations.r
Handling output_dir is unimplemented. Functionality currently exists as specifying outfile which defaults to stdout. Either write and test functionality to handle output dir, or remove entirely, and commit to emitting results soley to stdout.
This call fails:
This call succeeds:
Handling
output_dir
is unimplemented. Functionality currently exists as specifyingoutfile
which defaults to stdout. Either write and test functionality to handle output dir, or remove entirely, and commit to emitting results soley to stdout.