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DivyaratanPopli / Kinship_Inference

This is a tool to estimate pairwise relatedness from ancient DNA, taking in account contamination, ROH, ascertainment bias.
GNU General Public License v3.0
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Multiple Alternative Alleles in Bed File #18

Closed ocdorsey closed 3 months ago

ocdorsey commented 4 months ago

Can BED files have multiple alternative alleles at a single location?

DivyaratanPopli commented 3 months ago

Hi, this may cause an issue in parsing the bed file. KINgaroo expects bed file with biallelic sites.