DivyaratanPopli / Kinship_Inference

This is a tool to estimate pairwise relatedness from ancient DNA, taking in account contamination, ROH, ascertainment bias.
GNU General Public License v3.0
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Make KIN and KINgaroo available on PyPI #22

Open TCLamnidis opened 4 months ago

TCLamnidis commented 4 months ago

It would be great to upload KIN and KINgaroo to PyPI, making installation and use much easier for end users. From there, I'd happily add them to bioconda as well.

TCLamnidis commented 3 months ago

Apparently it is possible to get it on bioconda without PyPI. Almost got the recipe working now.

The problem is: in KINgaroo's argparse section, having metavar='' for the arguments breaks argparse somehow (see this thread).