Unit test

[qle2]

This PR was created to address Issues #74. In it, I:

• Mainly revamped our unit tests in the tests.

• Redid the config.yml so that the key CircleCI generates in every test is contained in each branch. This is to contain CircleCI errors from going to other branches.

• Removed rdkit2d-SMILES relationships and reduce the number of fragments we're generating for our Neo4j graphs.

I will be adding documentations to each testing functions soon

[pep8speaks]

Hello @qle2! Thanks for updating this PR. We checked the lines you've touched for PEP 8 issues, and found:

• In the file core/models.py:

Line 17:80: E501 line too long (113 > 79 characters) Line 22:80: E501 line too long (114 > 79 characters) Line 50:80: E501 line too long (86 > 79 characters) Line 117:80: E501 line too long (83 > 79 characters)

• In the file core/neo4j/fragments.py:

Line 64:80: E501 line too long (103 > 79 characters)

• In the file core/neo4j/nodes_to_neo4j.py:

Line 165:80: E501 line too long (95 > 79 characters)

• In the file core/neo4j/output_to_neo4j.py:

Line 91:80: E501 line too long (86 > 79 characters)

• In the file main.py:

Line 139:80: E501 line too long (114 > 79 characters)

• In the file new_tests/model_fixture.py:

Line 2:80: E501 line too long (119 > 79 characters) Line 3:80: E501 line too long (120 > 79 characters) Line 15:80: E501 line too long (118 > 79 characters) Line 16:80: E501 line too long (99 > 79 characters) Line 33:80: E501 line too long (115 > 79 characters) Line 36:80: E501 line too long (111 > 79 characters) Line 49:80: E501 line too long (118 > 79 characters) Line 53:80: E501 line too long (102 > 79 characters) Line 59:80: E501 line too long (80 > 79 characters) Line 78:1: E266 too many leading '#' for block comment Line 80:80: E501 line too long (118 > 79 characters) Line 88:36: W292 no newline at end of file Line 88:36: W292 no newline at end of file Line 88:36: W292 no newline at end of file

• In the file new_tests/test_analysis.py:

Line 6:10: E401 multiple imports on one line Line 7:80: E501 line too long (88 > 79 characters) Line 13:80: E501 line too long (119 > 79 characters) Line 15:80: E501 line too long (113 > 79 characters) Line 22:80: E501 line too long (87 > 79 characters) Line 23:80: E501 line too long (107 > 79 characters) Line 27:80: E501 line too long (116 > 79 characters) Line 28:80: E501 line too long (93 > 79 characters) Line 31:80: E501 line too long (91 > 79 characters) Line 34:1: W391 blank line at end of file

• In the file new_tests/test_features.py:

Line 9:80: E501 line too long (100 > 79 characters) Line 12:80: E501 line too long (84 > 79 characters) Line 16:80: E501 line too long (94 > 79 characters) Line 20:80: E501 line too long (90 > 79 characters) Line 22:80: E501 line too long (102 > 79 characters) Line 23:80: E501 line too long (93 > 79 characters) Line 24:80: E501 line too long (100 > 79 characters) Line 27:80: E501 line too long (87 > 79 characters) Line 32:80: E501 line too long (113 > 79 characters) Line 34:80: E501 line too long (115 > 79 characters) Line 37:80: E501 line too long (87 > 79 characters) Line 42:80: E501 line too long (113 > 79 characters) Line 44:80: E501 line too long (119 > 79 characters)

• In the file new_tests/test_ingest.py:

Line 15:80: E501 line too long (111 > 79 characters) Line 16:80: E501 line too long (109 > 79 characters) Line 23:80: E501 line too long (109 > 79 characters) Line 24:80: E501 line too long (110 > 79 characters) Line 26:80: E501 line too long (84 > 79 characters) Line 28:80: E501 line too long (88 > 79 characters)

• In the file new_tests/test_keras.py:

Line 2:80: E501 line too long (94 > 79 characters) Line 9:80: E501 line too long (114 > 79 characters) Line 13:80: E501 line too long (112 > 79 characters) Line 14:80: E501 line too long (91 > 79 characters) Line 23:80: E501 line too long (113 > 79 characters) Line 27:80: E501 line too long (113 > 79 characters) Line 28:80: E501 line too long (91 > 79 characters) Line 34:34: W292 no newline at end of file

• In the file new_tests/test_misc.py:

Line 2:10: E401 multiple imports on one line Line 11:1: E402 module level import not at top of file Line 12:1: E402 module level import not at top of file Line 19:80: E501 line too long (118 > 79 characters) Line 20:80: E501 line too long (119 > 79 characters) Line 22:80: E501 line too long (118 > 79 characters) Line 31:80: E501 line too long (82 > 79 characters) Line 34:43: W292 no newline at end of file

• In the file new_tests/test_regressors.py:

Line 17:80: E501 line too long (109 > 79 characters) Line 25:80: E501 line too long (92 > 79 characters) Line 31:80: E501 line too long (116 > 79 characters) Line 32:80: E501 line too long (116 > 79 characters) Line 33:80: E501 line too long (116 > 79 characters) Line 35:80: E501 line too long (115 > 79 characters) Line 43:80: E501 line too long (87 > 79 characters) Line 44:80: E501 line too long (86 > 79 characters) Line 48:1: W391 blank line at end of file

• In the file new_tests/test_storage.py:

Line 14:80: E501 line too long (113 > 79 characters) Line 20:80: E501 line too long (113 > 79 characters) Line 22:61: E127 continuation line over-indented for visual indent Line 22:80: E501 line too long (112 > 79 characters) Line 28:80: E501 line too long (84 > 79 characters) Line 33:80: E501 line too long (86 > 79 characters) Line 34:50: W292 no newline at end of file

• In the file new_tests/test_train.py:

Line 5:80: E501 line too long (88 > 79 characters) Line 10:80: E501 line too long (84 > 79 characters) Line 13:80: E501 line too long (119 > 79 characters) Line 22:80: E501 line too long (116 > 79 characters) Line 24:36: W292 no newline at end of file Line 24:36: W292 no newline at end of file Line 24:36: W292 no newline at end of file

• In the file tests/model_fixture.py:

Line 2:80: E501 line too long (119 > 79 characters) Line 3:80: E501 line too long (120 > 79 characters) Line 15:80: E501 line too long (118 > 79 characters) Line 16:80: E501 line too long (99 > 79 characters) Line 23:80: E501 line too long (86 > 79 characters) Line 24:80: E501 line too long (115 > 79 characters) Line 30:80: E501 line too long (114 > 79 characters) Line 32:80: E501 line too long (93 > 79 characters) Line 36:80: E501 line too long (115 > 79 characters) Line 39:80: E501 line too long (111 > 79 characters) Line 48:80: E501 line too long (89 > 79 characters) Line 49:80: E501 line too long (120 > 79 characters) Line 50:80: E501 line too long (113 > 79 characters) Line 56:80: E501 line too long (114 > 79 characters) Line 58:80: E501 line too long (80 > 79 characters) Line 62:80: E501 line too long (115 > 79 characters) Line 65:80: E501 line too long (111 > 79 characters) Line 87:80: E501 line too long (115 > 79 characters) Line 90:80: E501 line too long (111 > 79 characters) Line 114:1: E266 too many leading '#' for block comment Line 116:80: E501 line too long (118 > 79 characters) Line 124:36: W292 no newline at end of file Line 124:36: W292 no newline at end of file Line 124:36: W292 no newline at end of file

• In the file tests/test_analysis.py:

Line 6:10: E401 multiple imports on one line Line 13:80: E501 line too long (112 > 79 characters) Line 21:80: E501 line too long (114 > 79 characters) Line 22:80: E501 line too long (91 > 79 characters) Line 25:80: E501 line too long (89 > 79 characters) Line 28:1: W391 blank line at end of file

• In the file tests/test_features.py:

Line 10:80: E501 line too long (100 > 79 characters) Line 13:80: E501 line too long (114 > 79 characters) Line 17:80: E501 line too long (90 > 79 characters) Line 19:80: E501 line too long (102 > 79 characters) Line 20:80: E501 line too long (93 > 79 characters) Line 21:80: E501 line too long (100 > 79 characters) Line 24:80: E501 line too long (114 > 79 characters) Line 30:80: E501 line too long (113 > 79 characters) Line 32:80: E501 line too long (115 > 79 characters) Line 35:80: E501 line too long (114 > 79 characters) Line 41:80: E501 line too long (113 > 79 characters) Line 43:80: E501 line too long (119 > 79 characters)

• In the file tests/test_grid.py:

Line 6:32: E271 multiple spaces after keyword Line 12:80: E501 line too long (96 > 79 characters)

• In the file tests/test_ingest.py:

Line 5:32: E271 multiple spaces after keyword Line 10:80: E501 line too long (114 > 79 characters)

• In the file tests/test_keras.py:

Line 2:80: E501 line too long (94 > 79 characters) Line 9:80: E501 line too long (120 > 79 characters) Line 10:80: E501 line too long (84 > 79 characters) Line 17:80: E501 line too long (119 > 79 characters) Line 18:80: E501 line too long (84 > 79 characters)

• In the file tests/test_regressors.py:

Line 14:80: E501 line too long (114 > 79 characters) Line 27:80: E501 line too long (97 > 79 characters) Line 39:80: E501 line too long (96 > 79 characters) Line 49:80: E501 line too long (113 > 79 characters) Line 56:80: E501 line too long (84 > 79 characters)

• In the file tests/test_sklearn.py:

Line 2:80: E501 line too long (96 > 79 characters) Line 5:10: E401 multiple imports on one line Line 7:80: E501 line too long (83 > 79 characters) Line 12:80: E501 line too long (111 > 79 characters) Line 20:80: E501 line too long (110 > 79 characters) Line 29:80: E501 line too long (91 > 79 characters) Line 31:80: E501 line too long (82 > 79 characters) Line 36:1: W391 blank line at end of file

• In the file tests/test_storage.py:

Line 15:80: E501 line too long (114 > 79 characters) Line 25:80: E501 line too long (114 > 79 characters) Line 46:80: E501 line too long (114 > 79 characters) Line 52:50: W292 no newline at end of file

• In the file tests/test_train.py:

Line 5:80: E501 line too long (86 > 79 characters) Line 16:80: E501 line too long (95 > 79 characters) Line 26:34: W292 no newline at end of file

Comment last updated at 2020-08-03 17:25:52 UTC