DominikBuchner BOLDigger2 issues

DominikBuchner / BOLDigger2

An even better Python program to query .fasta files against the COI database of www.boldsystems.org

MIT License

11 stars 0 forks source link

issues

Newest

Newest Most commented Recently updated Oldest Least commented Least recently updated

How to break the loop of not downloading additional data for a single sequence

#25 OndroV opened 3 days ago
6
Unclosed file warning - Please close it before reopening

#24 OndroV closed 5 days ago
4
Problem with Bold login after unstable internet connexion

#23 bpostaire closed 1 week ago
6
Not assigning ranks lower than species level

#22 eershova01 closed 2 months ago
9
Login issue in the middle of run??

#21 naurasd closed 1 month ago
5
Index error

#20 LiseKlunder closed 2 months ago
3
No xlsx file written - issue with generating download links for additional data?

#19 naurasd closed 1 month ago
13
No more download links generated after BOLD downtimes

#18 DominikBuchner closed 2 months ago
1
Installing Boldigger2

#17 partridc closed 2 months ago
11
Permission Error

#16 lukazuvic closed 2 months ago
3
in _parse_tables: ValueError: No tables found

#15 naurasd closed 2 months ago
8
Understanding the total time required to finish run

#14 Anto007 closed 3 months ago
24
Lower levels not assigned when an intermediate level is missing

#13 naurasd opened 3 months ago
6
ValueError: numpy.dtype size changed

#12 vanessamata closed 3 months ago
2
RuntimeError: There is no current event loop in thread 'MainThread'.

#11 naurasd closed 3 months ago
3
IndexError: list index out of range

#10 voa257 closed 3 months ago
10
More missing modules

#9 dgslos closed 3 months ago
2
Make identify argument required

#8 dgslos closed 3 months ago
3
lxml_html_clean module missing

#7 dgslos closed 3 months ago
1
Fallback to all records does not work properly for large datasets

#6 DominikBuchner closed 4 months ago
1
Automated login/username and password input

#5 SchistoDan closed 4 months ago
3
Not all hits without a species level download trigger a 2nd download

#4 DominikBuchner closed 4 months ago
0
Allow adjusting taxonomic similarity thresholds

#3 hjarnek closed 4 months ago
2
Pandas requires tables 3.8.0 or newer

#2 bwprice closed 4 months ago
2
Error message: Couldn't find a tree builder

#1 01Andrea01 closed 4 months ago
10