How to visualize the Synapse segmentation results

Dootmaan / MT-UNet

Official Code for *Mixed Transformer UNet for Medical Image Segmentation*

MIT License

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How to visualize the Synapse segmentation results #41

Open vinsimok opened 10 months ago

vinsimok commented 10 months ago

I've noticed that the paper contains comparative segmentation effect diagrams of different methods. How should I obtain these diagrams? Should I use code, or should I open the predicted values with ITK-SNAP software and then search for them？

Dootmaan commented 10 months ago

Hi @vinsimok, the visualization results in the papar are obtained with ITK-Snap. You can do so by directly importing the predicted segmentation mask after loading the image itself in ITK-Snap.