Dowell-Lab / FStitch

Fast Stitch Reader (FStitch) -- fast-processing tool written in C for the annotation of regions of active transcription.
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"report" option does not work #11

Open magruca opened 5 years ago

magruca commented 5 years ago

In GitLab by @magr0763 on Oct 29, 2018, 08:42

Report in segment (-r --report) does not currently work. It was built into the ParamWrapper but it's not anywhere in main_segment.cpp. Either it was removed at some point or it's entirely possible it never existed. It's also possible it's buried somewhere else I guess but this would make less sense. "report" variable is never imported, so it would also have to exist under another variable name. This would be a good thing to have and is probably relatively easy to add in. That said it's easy enough to grep out those regions after the fact in the meantime. That said, it's now commented out of the documentation.