Here are the instructions for creating histoboards:
5. Create a config files that determines what the histoboard will look for.
An example is (HerP2.config for HerP2):
[Defaults]
ExperimentName=HerP2
factor=5000
output=/tmp/hboards
[Markers]
Herceptin=fcJPGs redHerceptin
Irinotecan=fcJPGs greenIrino
HPG=fcJPGs magentaHPG
6. Run Stefan's magical histoboard function in the terminal:
cd /Users/fmoosvi/sarpy/python/sarpy/io
./histoBoard.py -c /Users/fmoosvi/hdata/HerP2/HerP2.config
When I run this command again, I now get this error:
Fatal Python error: PyThreadState_Get: no current thread
Abort trap: 6
Here are the instructions for creating histoboards:
When I run this command again, I now get this error: