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DragaDoncila
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napari-sentinel-to-zarr
Writer plugin for napari to allow saving Sentinel tiffs out to ome-zarr
MIT License
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Raw Sentinel-2 data?
#38
EmanuelCastanho
opened
3 years ago
2
Final touches
#37
DragaDoncila
closed
4 years ago
0
Add ndvi layer
#36
DragaDoncila
closed
4 years ago
0
Add NDVI layer to viewer
#35
DragaDoncila
closed
4 years ago
0
Add label differences to load script
#34
DragaDoncila
closed
4 years ago
1
Read in shape files
#33
DragaDoncila
opened
4 years ago
0
Remove unused channels
#32
DragaDoncila
closed
4 years ago
1
Always display full coordinates
#31
DragaDoncila
closed
4 years ago
0
Add ndvi compute
#30
DragaDoncila
closed
4 years ago
1
Check correspondence between plot coordinates and "real" coordinates
#29
DragaDoncila
closed
4 years ago
1
Movement of vertical bar is proportional to all timepoints
#28
DragaDoncila
closed
4 years ago
0
Fix labels scale to display the labels across all time points
#27
DragaDoncila
closed
4 years ago
0
Remove all but NIR and true colour channels
#26
DragaDoncila
closed
4 years ago
0
Labels only display on first time-point for napari 0.4
#25
DragaDoncila
closed
4 years ago
0
Fix coordinate display
#24
DragaDoncila
closed
4 years ago
2
Add initial script for showing map differences
#23
DragaDoncila
closed
4 years ago
0
Add toolbar to plot dock widget
#22
DragaDoncila
closed
4 years ago
0
Add callback to compute contrast limits on currently zoomed in area
#21
DragaDoncila
opened
4 years ago
0
Fix coordinate display in intensity plot
#20
DragaDoncila
closed
4 years ago
0
Add NDVI to widget plot
#19
DragaDoncila
closed
4 years ago
1
Fix vertical bar on intensity script
#18
DragaDoncila
closed
4 years ago
0
Add script to view difference between two label maps
#17
DragaDoncila
closed
4 years ago
1
Add matplotlib toolbar to intensity viewing script
#16
DragaDoncila
closed
4 years ago
0
Add ability to plot intensity for different pyramid levels
#15
DragaDoncila
closed
4 years ago
0
Add intensities script
#14
DragaDoncila
closed
4 years ago
1
Move intensity loading script into load-all
#13
DragaDoncila
closed
4 years ago
0
Allow pixel intensities script to take path argument
#12
DragaDoncila
closed
4 years ago
0
Transposing x,y coords correctly for interpolated ims
#11
DragaDoncila
closed
4 years ago
1
Prepend Raw to raw layers, mention in docs that labels can be zarr
#10
DragaDoncila
closed
4 years ago
1
Fix contrast limits
#9
DragaDoncila
closed
4 years ago
1
Axis transpose is incorrect for interpolated tiff to zarr
#8
DragaDoncila
closed
4 years ago
0
Always compute contrast limits histogram on lowest-resolution pyramid level
#7
DragaDoncila
closed
4 years ago
1
Load script: use timepoints from image rather than hard coding
#6
DragaDoncila
opened
4 years ago
0
Load script repeats channel names
#5
DragaDoncila
closed
4 years ago
0
Add README details, add a small test, remove python 3.6, add version
#4
DragaDoncila
closed
4 years ago
0
Add script to load raw, interpolated and label images, with scale
#3
DragaDoncila
closed
4 years ago
0
Add script to display intensity of pixel across time.
#2
DragaDoncila
closed
4 years ago
0
Add code to run complete package from raw tiffs to multiscale zarrs
#1
DragaDoncila
closed
4 years ago
0