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Drinchai / BloodGen3Module

This R package for performing module repertoire analyses and generating fingerprint representations
GNU General Public License v2.0
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Only plot 1 grid visulization #4

Open KDong1231 opened 2 years ago

KDong1231 commented 2 years ago

Hi,

Thanks for developing this nice enrichment tool!

I try to reproduce the analysis in the demo data but I can't plot the second part of the Fingerprintplot (the heatmap with annotation information) when using the following script:

gridplot(Group_df, cutoff = 15, Ref_group = "Control", filename= "test.file.pdf")

Is it an issue? Or is the "gridplot" function supposed not to plot the annotation information in heatmap?

Best, KD

Drinchai commented 2 years ago

HI KD, Sorry for did not response to your question. I did not add the function to plot the map into the package. However, the map of module is fixed so you can download it from here; https://github.com/Drinchai/DC_Gen3_Module_analysis/blob/master/2020%20July26%20Group%20comparison_Fig1.png

Best, DR