mkv_covar.in and mkv_prob.in files are not created because the path set in MarkovWeatherFileGenerator.R is incorrect

DrylandEcology / rSFSTEP2

R program that interfaces with the STEPWAT2 C code and runs in parallel for multiple sites, climate scenarios, disturbance regimes, and time periods

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mkv_covar.in and mkv_prob.in files are not created because the path set in MarkovWeatherFileGenerator.R is incorrect #136

Closed kpalmqui closed 5 years ago

kpalmqui commented 5 years ago

Each set of mkv_covar.in and mkv_prob.in files is first put into a Site folder and then into a folder for the given scenario. The path where these files are currently written in MarkovWeatherFileGenerator.R does not exist.

Current path:

assembly_output/Site_siteID_scenario

Correct path:

assembly_output/Site_siteID/Site_siteID_scenario

kpalmqui commented 5 years ago

Resolved by above commit