Hi, I have some unpaired scRNA-seq and scATAC-seq data, they are sequencing the same samples, but in separate scRNA-seq and scATAC-seq assays, so the cell barcodes are different in these datasets. However, cell clusters are highly concordant between RNA and ATAC datasets. I wonder if LINGER can handle these datasets? Thanks!
Li-ZhiD
commented
4 days ago
Hi, I have some unpaired scRNA-seq and scATAC-seq data, they are sequencing the same samples, but in separate scRNA-seq and scATAC-seq assays, so the cell barcodes are different in these datasets. However, cell clusters are highly concordant between RNA and ATAC datasets. I wonder if LINGER can handle these datasets? Thanks!