Durenlab / RegNMF

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Error in loading 10X Genomics Multiome ATAC+RNA data #2

Open YangLi-Bio opened 2 years ago

YangLi-Bio commented 2 years ago

I downloaded the 10X Genomics Multiome ATAC+RNA data from "https://www.10xgenomics.com/resources/datasets?menu%5Bproducts.name%5D=Single%20Cell%20Multiome%20ATAC%20%2B%20Gene%20Expression&query=&page=1&configure%5Bfacets%5D%5B0%5D=chemistryVersionAndThroughput&configure%5Bfacets%5D%5B1%5D=pipeline.version&configure%5BhitsPerPage%5D=500".

When I tried loading the data using read_ATAC_GEX, I got the following error: Error in h(simpleError(msg, call)) : error in evaluating the argument 'x' in selecting a method for function 'rowSums': Cholmod error 'problem too large' at file ../Core/cholmod_dense.c, line 102

Could you please help me figure out the reason and solution?

Thank you!