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EBI-Metagenomics / HoloFoodR

R interface for HoloFood resource
https://ebi-metagenomics.github.io/HoloFoodR/
Artistic License 2.0
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Include animal metadata in `colData()` #14

Closed artur-sannikov closed 4 months ago

artur-sannikov commented 4 months ago

Animals have metadata. For example, a salmon here, or chicken here under Sample --> Sample metadata.

Some algorithms like MOFA can use colData variables as group variables (see OMA book), so this data can included as metadata.

Chickens also have "Pen" metadata.

TuomasBorman commented 4 months ago

https://github.com/EBI-Metagenomics/HoloFoodR/pull/17