EBI-Metagenomics / emg-viral-pipeline

VIRify: detection of phages and eukaryotic viruses from metagenomic and metatranscriptomic assemblies
Apache License 2.0
119 stars 16 forks source link

Toil-cwl execution VirSorter "empty" folder #19

Closed mberacochea closed 4 years ago

mberacochea commented 4 years ago

VirSorter results folder "is" empty for the parse script when the CWL pipeline is executed with toil.

mberacochea commented 4 years ago

Fixed https://github.com/EBI-Metagenomics/emg-viral-pipeline/commit/5f31e4cdb3fc1c240b5f2ab8615848c7d2494cdc