EBI-Metagenomics / genome_uploader

Python script to upload bins and MAGs to ENA (European Nucleotide Archive)
Apache License 2.0
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How to put multiple run accession #3

Closed SilasK closed 1 year ago

SilasK commented 1 year ago

When I assemble MAGs I take all the runs from the same biosample. As these represent often different lanes or different sequencing runs of the same sample. How can I fill in these in the column run_accessions ? e.g. can I separate them by a comma?

Ge94 commented 1 year ago

Hi Silas, Yes, if multiple runs were used to generate the genome, they should be listed as comma-separated in the run_accessions column. I will add this to the documentation.