Modified the annotate_gff.py script (removed dashes when IPR accession is unknown, fixed COG handling, added GO-terms, added e-value filter for eggNOG and InterProScan results)
Fixed a bug in the readme generation script to correctly detect Archaea presence
Enabled pre-determined MGYG accessions
Added a script to post-process GTDB results if there are unknown genomes
Added fallback to NCBI when getting sample location metadata if ENA returns an error (non GCA genomes)
Added a switch to FastTree from IQTree if number of species reps is >=2k
Added accounting for unclassified genomes in website JSONs