Conditional usage of IQTree or FastTree

EBI-Metagenomics / genomes-catalogue-pipeline

MGnify genome analysis pipeline

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Closed mberacochea closed 7 months ago

mberacochea commented 7 months ago

For more than 2000 sequences, FastTree will be used. IQTree tree computation is too heavy for more than 2k sequences.

I haven't teste this.