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EBI-Metagenomics
/
mettannotator
Apache License 2.0
37
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4
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little problem
#45
davidmadariaga
closed
1 month ago
2
error
#44
vicru93
opened
1 month ago
6
Dev -> main for release v1.3
#43
mberacochea
closed
1 month ago
2
Fixes for ref dbs mounts for docker in ips and unifire. Mem limit to emapper --dbmem flag
#42
mberacochea
closed
1 month ago
3
Unifre mount issue with docker.
#41
mberacochea
closed
1 month ago
1
Missing output file(s) `unifire/predictions_arba.out` expected by process `EBIMETAGENOMICS_METTANNOTATOR:METTANNOTATOR:UNIFIRE`
#40
Andrewab9
closed
1 month ago
4
Unifre mount issue with docker.
#39
mberacochea
closed
1 month ago
1
Error executing process EBIMETAGENOMICS_METTANNOTATOR:METTANNOTATOR:UNIFIRE with exit status 125
#38
xeniaroda29
closed
1 month ago
7
Added citation
#37
tgurbich
closed
2 months ago
1
Dev
#36
tgurbich
closed
2 months ago
1
Feature/speedup
#35
tgurbich
closed
2 months ago
1
Fast mode nextflow changes
#34
mberacochea
closed
2 months ago
1
Dev
#33
tgurbich
closed
3 months ago
1
Feature/mobilome instructions
#32
tgurbich
closed
3 months ago
1
Feature/pre processing script
#31
tgurbich
closed
3 months ago
1
Bugfix/unifire inputs
#30
tgurbich
closed
3 months ago
1
Feature/add plot
#29
tgurbich
closed
3 months ago
1
Feature/enable archaea
#28
tgurbich
closed
4 months ago
1
Feature/bakta flag
#27
tgurbich
closed
4 months ago
1
Feature/update amrfinderplus
#26
tgurbich
closed
4 months ago
1
Feature/update amrfinder db
#25
tgurbich
closed
4 months ago
1
Dev
#24
tgurbich
closed
4 months ago
1
Nested elements coordinates fix
#23
Ales-ibt
closed
5 months ago
2
Deduplication script with tests
#22
tgurbich
closed
5 months ago
1
Rename tool dbs folder
#21
mberacochea
closed
5 months ago
1
Documentation
#20
tgurbich
closed
5 months ago
1
Some feedback for the README file
#19
mberacochea
closed
6 months ago
1
Fix update gff with mapped uniprot ids
#18
tgurbich
closed
6 months ago
0
Script to run blastp on proteome, and assign uniprot ids
#17
nds
closed
6 months ago
1
Feature/mobilome into gff script
#16
tgurbich
closed
6 months ago
1
Deduplication script
#15
tgurbich
closed
5 months ago
1
Added unit tests for add_hypothetical_protein_description
#14
tgurbich
closed
6 months ago
1
Update GFF file with UniProt identifiers
#13
nds
closed
6 months ago
2
Fix ncrna
#12
tgurbich
closed
6 months ago
1
Script to add essentiality data to 9th column of CDS lines
#11
nds
closed
6 months ago
0
Feature/spell out ipr
#10
tgurbich
closed
6 months ago
1
Feature/hypothetical protein replacement
#9
tgurbich
closed
6 months ago
1
Bugfix/escaped character handling
#8
tgurbich
closed
7 months ago
1
Test case using one genome from MGnify genomes
#7
mberacochea
closed
6 months ago
1
Remove hardcoding
#6
tgurbich
closed
7 months ago
2
Update dbcan
#5
tgurbich
closed
7 months ago
2
Databases download process
#4
mberacochea
closed
7 months ago
2
Feature/gff post processing split cds
#3
mberacochea
closed
9 months ago
2
antismash to gff conversion
#2
mberacochea
closed
9 months ago
2
Extend annotations
#1
tgurbich
closed
7 months ago
2