Biohackaton2022 genomes nb

EBI-Metagenomics / notebooks

MGnify documentation and Jupyter Lab notebooks to support downstream analysis of MGnify data (EMBL-EBI's metagenomics platform)

https://ebi-metagenomics.github.io/notebooks

Apache License 2.0

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Closed vestalisvirginis closed 1 year ago

vestalisvirginis commented 2 years ago

notebook showing examples of how to connect to the genomes MGnify API, how to retrieve and save data, examples of graphics, as well as how to query your own MAGs to the database genome-catalogue.