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EBISPOT
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OntoString
Tool for curating mappings from free text to ontology terms
https://www.ebi.ac.uk/spot/ontostring
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Mappings are added then immediately removed by Robot User
#148
jamesamcl
opened
3 years ago
4
Added endpoint to rerun matchmaking.
#147
tudorgroza
closed
3 years ago
0
Made context non-mandatory in retrieving entities.
#146
tudorgroza
closed
3 years ago
1
Retrieving terms does not work if context is not provided (all terms in project)
#145
jamesamcl
closed
3 years ago
1
Stats does not work if context is not provided (project wide stats)
#144
jamesamcl
opened
3 years ago
2
Number of CURRENT terms not included in stats
#143
jamesamcl
opened
3 years ago
2
searchOLS PREFERRED_ONTOLOGIES not filtered by preferred ontologies
#142
jamesamcl
closed
3 years ago
4
Minor Code Cleanup
#141
fykidwai
closed
2 years ago
1
Added ability to auto-map multiple terms.
#140
tudorgroza
closed
3 years ago
0
Added STDOUT logger.
#139
tudorgroza
closed
3 years ago
0
Updating users roles
#138
jamesamcl
closed
3 years ago
0
Develop
#137
jamesamcl
closed
3 years ago
0
Added /v1/me
#136
tudorgroza
closed
3 years ago
0
Develop
#135
jamesamcl
closed
3 years ago
0
Add some initial docuemntation, various UI work and fixes
#134
jamesamcl
closed
3 years ago
0
merge
#133
jamesamcl
closed
3 years ago
0
What is the URI supposed to be for "local" sources?
#132
jamesamcl
closed
3 years ago
2
Refactored ontology term context implementation.
#131
tudorgroza
closed
3 years ago
0
Extended OLS querying mechanism.
#130
tudorgroza
closed
3 years ago
0
Include context name in entity object
#129
jamesamcl
closed
3 years ago
2
Added support for CSV import.
#128
tudorgroza
closed
3 years ago
0
Fixed retrieval of mapped onto terms.
#127
tudorgroza
closed
3 years ago
0
Support CSV for data upload
#126
jamesamcl
closed
3 years ago
0
OLS search options
#125
jamesamcl
closed
3 years ago
5
Changed matchmaking mechanism to take graph restrictions into account.
#124
tudorgroza
closed
3 years ago
0
Hardly any of the terms returned have any entities
#123
jamesamcl
closed
3 years ago
7
Get counts of all term statuses in a project
#122
jamesamcl
closed
3 years ago
3
Changed signature of the GET ontology terms endpoint.
#121
tudorgroza
closed
3 years ago
0
Expand OntoTerm DTO returned by GET.
#120
tudorgroza
closed
3 years ago
0
Expanded project context definition.
#119
tudorgroza
closed
3 years ago
0
Add HCA project - including the 24 contexts.
#118
tudorgroza
closed
3 years ago
0
Change mapping mechanism to take into account new graphRestriction property of the context configuration.
#117
tudorgroza
closed
3 years ago
0
Expand the context configuration to cater for the HCA and FAANG requirements.
#116
tudorgroza
closed
3 years ago
0
Fixed ontology terms export.
#115
tudorgroza
closed
3 years ago
0
Added endpoint to export onto terms.
#114
tudorgroza
closed
3 years ago
0
Added endpoint to action ontology terms.
#113
tudorgroza
closed
3 years ago
0
Added pagination to the OntologyTermController GET call.
#112
tudorgroza
closed
3 years ago
0
Add endpoint to export list of terms in a CSV file
#111
tudorgroza
closed
3 years ago
0
FAANG context
#110
henrietteharmse
opened
3 years ago
0
Added endpoint to retrieve ontology terms by context and status.
#109
tudorgroza
closed
3 years ago
0
Fixed ontology term creation and failing tests.
#108
tudorgroza
closed
3 years ago
0
Add endpoint to add a single comment to a list of given mapping IDs.
#107
tudorgroza
closed
3 years ago
1
Add endpoint to get all mappings associated with ontology terms with a given status
#106
tudorgroza
closed
3 years ago
0
Which ontology do terms belong to?
#105
jamesamcl
closed
3 years ago
1
Added mechanism to enable update tasks in multi-environment setting.
#104
tudorgroza
closed
3 years ago
0
Releasing alpha v3
#103
tudorgroza
closed
3 years ago
0
Fixed routes for PROD
#102
tudorgroza
closed
3 years ago
0
Attempting to fix CI pipeline for production release.
#101
tudorgroza
closed
3 years ago
0
Release of v1.0.0alpha
#100
tudorgroza
closed
3 years ago
0
Added entity filtering by context.
#99
tudorgroza
closed
3 years ago
0
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