EBISPOT / efo

Github repo for the Experimental Factor Ontology (EFO)
https://www.ebi.ac.uk/efo/
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rename EFO:0007540 to animal viral hepatitis #139

Closed simonjupp closed 6 years ago

simonjupp commented 6 years ago

Moving ticket from EBISPOT/ols#203 to here cc @cmungall

https://www.ebi.ac.uk/ols/ontologies/efo/terms?iri=http%3A%2F%2Fwww.ebi.ac.uk%2Fefo%2FEFO_0007540

image

The hierarchy doesn't make much sense until you realize that the intent is that the subclass is for non-human animals.

 is_a MESH:D014777 ! Virus Diseases [DEF: "A general term for diseases produced by viruses."]
   is_a MESH:D006524 ! Hepatitis, Viral, Animal ***  [DEF: "INFLAMMATION of the LIVER in animals due to viral infection."]
   is_a MESH:D006525 ! Hepatitis, Viral, Human ***  [DEF: "INFLAMMATION of the LIVER in humans due to infection by VIRUSES. There are several significant types of human viral hepatitis with infection caused by enteric-transmission (HEPATITIS A; HEPATITIS E) or blood transfusion (HEPATITIS B; HEPATITIS C; and HEPATITIS D)."]

The EFO definition_citation is for MESH:D006524, but the definition doesn't mention animals. I suggest changing the def and label

paolaroncaglia commented 6 years ago

Edit EFO:0007540 ‘viral hepatitis’:

paolaroncaglia commented 6 years ago

@cmungall This is done.