User story:
As a user who wants to format my GWAS analysis output into a ready-to-submit format to the GWAS catalog, I want to click several buttons to get the result downloaded and ready to submit.
User scenarios:
Occasional Users (external users)
Occasional Users (external users)
Frequent users (Internal users)
Number of publications needed to handle (number of configure files need to be generated)
1
1
>1
Number of files need to handle
Single file (or less than 5 files)
Batch files
Batch files
Generate the configure file
Web assembly (generate, edit and apply configure files) - 4GB limitation
Web assembly
Terminal (Need instruction)
Edit the configure file
Web assembly
Web assembly
VScode / micro (Need instruction)
Apply the configure file to sumstats
Web assembly
Terminal (support local running, PBS, LSF,slurm)- needs a clear instruction
Terminal (Need instruction)
To-do list:
Python code
[x] Integrate sum-stats-formatter into gwas-sumstats-tools (!)
[ ] Improve the speed of validation (maybe)
Webassembly
[x] A simple demo only contains the validation function from gwas-sumstats-tools
[x] Active the function of generating configure file in formatted
[x] Active the function of applying a configure to the input
[x] Allow the user to edit the configure in the text box and apply the configure file to the input file
User story: As a user who wants to format my GWAS analysis output into a ready-to-submit format to the GWAS catalog, I want to click several buttons to get the result downloaded and ready to submit.
To-do list: