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EBISPOT
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gwas-sumstats-validator
GWAS Summary Statistics File Validator
Apache License 2.0
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TypeError: read_csv() got an unexpected keyword argument 'error_bad_lines'
#72
carbocation
opened
1 year ago
1
bug fix for exiting rather than breaking
#71
jdhayhurst
closed
1 year ago
0
investigate the use of Pandera
#70
jdhayhurst
closed
1 year ago
1
Bump certifi from 2020.6.20 to 2022.12.7
#69
dependabot[bot]
opened
1 year ago
0
Bump py from 1.10.0 to 1.11.0
#68
dependabot[bot]
opened
1 year ago
0
Dev
#67
jdhayhurst
closed
1 year ago
0
update bumpversion conf, add get version, add ref allele
#66
jdhayhurst
closed
1 year ago
0
reimplement with csv validator lib
#65
jdhayhurst
opened
2 years ago
1
add duplication and autosome check to validator
#64
jdhayhurst
opened
2 years ago
0
Schema update v1.0
#63
jdhayhurst
closed
2 years ago
0
Bump numpy from 1.17.0 to 1.22.0
#62
dependabot[bot]
opened
2 years ago
0
Dev
#61
jdhayhurst
closed
2 years ago
0
Build and deploy to pypi is failing
#60
jdhayhurst
closed
2 years ago
2
Dev
#59
jdhayhurst
closed
2 years ago
0
Bump numpy from 1.17.0 to 1.21.0
#58
dependabot[bot]
closed
2 years ago
1
Gwas sumstats validator#54
#57
jdhayhurst
closed
2 years ago
0
validator update so OR should be positive
#56
jdhayhurst
closed
2 years ago
3
update readme
#55
jdhayhurst
closed
2 years ago
0
option to drop bad lines isn't working
#54
jdhayhurst
closed
2 years ago
3
Update schema to meet the recommendations from the working groups
#53
jdhayhurst
closed
1 year ago
1
Enable schema versioning
#52
jdhayhurst
closed
2 years ago
1
Documentation should clarify how to run the validator script for non-Python users
#51
dpanyard
opened
2 years ago
4
conda env for ss-validate not working
#50
jdhayhurst
closed
2 years ago
1
Validator should catch error when file is blank
#49
jdhayhurst
closed
1 year ago
1
Report a useful error message if the file is not a table
#48
jdhayhurst
closed
1 year ago
1
Bump urllib3 from 1.25.10 to 1.26.5
#47
dependabot[bot]
closed
2 years ago
1
changing sonar coverage config
#46
jdhayhurst
closed
3 years ago
1
Sonar integration
#45
jdhayhurst
closed
3 years ago
0
Bump py from 1.8.0 to 1.10.0
#44
dependabot[bot]
closed
1 year ago
1
Dev
#43
jdhayhurst
closed
3 years ago
0
drop invalid lines arg not having expected outcome
#42
jdhayhurst
closed
3 years ago
1
Bump pygments from 2.6.1 to 2.7.4
#41
dependabot[bot]
closed
1 year ago
1
bug when there are no pvalues in scientific notation
#40
jdhayhurst
closed
3 years ago
0
Handle no scientific notation
#39
jdhayhurst
closed
3 years ago
0
relaxing so p-values can equal 1
#38
jdhayhurst
closed
3 years ago
0
p-values of 1 should pass
#37
jdhayhurst
closed
3 years ago
0
change build to before_script
#36
jdhayhurst
closed
3 years ago
0
Dev
#35
jdhayhurst
closed
3 years ago
0
Bump bleach from 3.1.5 to 3.3.0
#34
dependabot[bot]
closed
1 year ago
1
Dev
#33
jdhayhurst
closed
3 years ago
0
deploy to pypi
#32
jdhayhurst
closed
3 years ago
0
deploy to test pypi
#31
jdhayhurst
closed
3 years ago
0
gitlab-ci
#30
jdhayhurst
closed
3 years ago
0
Ci cd
#29
jdhayhurst
closed
3 years ago
0
Small floats
#28
jdhayhurst
closed
3 years ago
0
validator should not pass date where quotations are given in fields
#27
jdhayhurst
closed
1 year ago
1
catch NULL byte error
#26
jdhayhurst
closed
3 years ago
0
changed log level so info goes to logfile by default
#25
jdhayhurst
closed
3 years ago
0
adding pbar
#24
jdhayhurst
closed
3 years ago
0
Make the validator more portable/user friendly
#23
jdhayhurst
closed
1 year ago
1
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