Convert genes to Ensembl Gene IDs

EBIvariation / opentargets-pharmgkb

Pipeline to provide evidence strings for Open Targets from PharmGKB

Apache License 2.0

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Convert genes to Ensembl Gene IDs #2

Closed apriltuesday closed 1 year ago

apriltuesday commented 1 year ago

If possible, we should do this directly using data from PharmGKB (see "Primary Data"). Otherwise we need to confirm the nomenclature used in the Clinical Annotations table and then look into using e.g. BioMart, as for ClinVar.