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EBIvariation / opentargets-pharmgkb

Pipeline to provide evidence strings for Open Targets from PharmGKB
Apache License 2.0
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Review counts and metrics spreadsheet #35

Open apriltuesday opened 8 months ago

apriltuesday commented 8 months ago

Now that we are performing regular submissions, we should review the counts being gathered and the metrics spreadsheet, and add ones as needed.

apriltuesday commented 2 months ago

As we allow any field to be missing, it would be useful to have a concept of a "complete evidence string" and then track percentage of clinical annotations that generate at least one complete evidence string - analogous to ClinVar submission metrics. This lets us keep track of where we want to improve coverage (e.g. haplotype IDs).