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EBIvariation / vcf-validator

Validation suite for Variant Call Format (VCF) files, implemented using C++11
Apache License 2.0
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vcf-validator error #213

Closed mclr47 closed 2 years ago

mclr47 commented 2 years ago

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Greetings! I not sure how address the error : column cell values in the ID such as 1:56873 may be problem , but this was the suggestion from a previous error[not shown] . Also column names "33-16", "38-11" etc. ~~> these are legitimated taxa names for maze and are used by other software such TASSEL,GAPIT. The unix wc for each row in the file seems to be the same .

Thank you!

tcezard commented 2 years ago

This is the wrong vcf-validator github repository: You seem to be using the perl tool and you can find the corresponding repository here