Incorrect header lines in v4.3/passed/complexfile_passed_000.vcf and *_meta_pedigreedb.vcf

EBIvariation / vcf-validator

Validation suite for Variant Call Format (VCF) files, implemented using C++11

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Incorrect header lines in v4.3/passed/complexfile_passed_000.vcf and *_meta_pedigreedb.vcf #250

Open daviesrob opened 1 week ago

daviesrob commented 1 week ago

AnalysisTitleBrackets and pedigreeDB are structured header line (due to the < ... > brackets), but do not have an ID field. VCF 4.3 onwards states that structured lines should always have an ID.

These were originally reported on hts-specs. See samtools/hts-specs#608, samtools/hts-specs#620 which fixes pedigreeDB, samtools/hts-specs#772, and samtools/hts-specs#773 for a proposed fix for AnalysisTitleBrackets.