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EESI / themetagenomics

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Version of the database Silva #1

Open hbillard opened 6 years ago

hbillard commented 6 years ago

When we use tax4fun with package 'themtagenomics', which is the version of the database Silva? Silva 123? Silva 128?

Thank you in advance, Best regards.

cmaietta commented 5 years ago

Did anyone resolve which version of the Silva database is used in "themetagenomics" t4f function?

Thanks!

chodarq commented 4 years ago

I'm back with this question. Did anyone resolve which version of the Silva database is used in t4f function? Thanks!

cmaietta commented 4 years ago

I'm back with this question. Did anyone resolve which version of the Silva database is used in t4f function? Thanks!

It was Silva v. 123 when I ran this analysis in 2018.

sw1 commented 4 years ago

It's whatever version the original tax4fun package used: http://tax4fun.gobics.de/

On Tue, Jun 2, 2020 at 12:45 PM chodarq notifications@github.com wrote:

I'm back with this question. Did anyone resolve which version of the Silva database is used in t4f function? Thanks!

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