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EESSI / software-layer

Software layer of the EESSI project
https://eessi.github.io/docs/software_layer
GNU General Public License v2.0
23 stars 46 forks source link

[2023.06]{2023a} R-bundle-Bioconductor v3.18 #533

Closed bedroge closed 5 months ago

bedroge commented 6 months ago 
5 out of 156 required modules missing:

* RapidJSON/1.1.0-20230928-GCCcore-12.3.0 (RapidJSON-1.1.0-20230928-GCCcore-12.3.0.eb)
* utf8proc/2.8.0-GCCcore-12.3.0 (utf8proc-2.8.0-GCCcore-12.3.0.eb)
* Arrow/14.0.1-gfbf-2023a (Arrow-14.0.1-gfbf-2023a.eb)
* arrow-R/14.0.1-foss-2023a-R-4.3.2 (arrow-R-14.0.1-foss-2023a-R-4.3.2.eb)
* R-bundle-Bioconductor/3.18-foss-2023a-R-4.3.2 (R-bundle-Bioconductor-3.18-foss-2023a-R-4.3.2.eb)
eessi-bot[bot] commented 5 months ago
New job on instance eessi-bot-mc-aws for architecture x86_64-intel-haswell for repository eessi.io-2023.06-software in job dir /project/def-users/SHARED/jobs/2024.04/pr_533/10039 date job status comment
Apr 30 19:22:35 UTC 2024 submitted job id 10039 awaits release by job manager
Apr 30 19:23:52 UTC 2024 released job awaits launch by Slurm scheduler
Apr 30 19:30:32 UTC 2024 running job 10039 is running
May 01 01:33:44 UTC 2024 finished
:grin: SUCCESS (click triangle for details)
Details
:white_check_mark: job output file slurm-10039.out
:white_check_mark: no message matching ERROR:
:white_check_mark: no message matching FAILED:
:white_check_mark: no message matching required modules missing:
:white_check_mark: found message(s) matching No missing installations
:white_check_mark: found message matching .tar.gz created!
Artefacts
eessi-2023.06-software-linux-x86_64-intel-haswell-1714525397.tar.gzsize: 7238 MiB (7590533792 bytes)
entries: 40202
modules under _2023.06/software/linux/x8664/intel/haswell/modules/all
Arrow/14.0.1-gfbf-2023a.lua
arrow-R/14.0.1-foss-2023a-R-4.3.2.lua
RapidJSON/1.1.0-20230928-GCCcore-12.3.0.lua
R-bundle-Bioconductor/3.18-foss-2023a-R-4.3.2.lua
utf8proc/2.8.0-GCCcore-12.3.0.lua
software under _2023.06/software/linux/x8664/intel/haswell/software
Arrow/14.0.1-gfbf-2023a
arrow-R/14.0.1-foss-2023a-R-4.3.2
RapidJSON/1.1.0-20230928-GCCcore-12.3.0
R-bundle-Bioconductor/3.18-foss-2023a-R-4.3.2
utf8proc/2.8.0-GCCcore-12.3.0
other under _2023.06/software/linux/x8664/intel/haswell
no other files in tarball
May 01 01:33:44 UTC 2024 test result
:grin: SUCCESS (click triangle for details)
ReFrame Summary
[ PASSED ] Ran 9/9 test case(s) from 9 check(s) (0 failure(s), 0 skipped, 0 aborted)
Details
:white_check_mark: job output file slurm-10039.out
:white_check_mark: no message matching ERROR:
:white_check_mark: no message matching [\s*FAILED\s*].*Ran .* test case
May 01 06:40:25 UTC 2024 uploaded transfer of eessi-2023.06-software-linux-x86_64-intel-haswell-1714525397.tar.gz to S3 bucket succeeded
eessi-bot[bot] commented 5 months ago
New job on instance eessi-bot-mc-aws for architecture x86_64-intel-skylake_avx512 for repository eessi.io-2023.06-software in job dir /project/def-users/SHARED/jobs/2024.04/pr_533/10040 date job status comment
Apr 30 19:22:39 UTC 2024 submitted job id 10040 awaits release by job manager
Apr 30 19:23:54 UTC 2024 released job awaits launch by Slurm scheduler
Apr 30 19:31:46 UTC 2024 running job 10040 is running
May 01 00:30:51 UTC 2024 finished
:grin: SUCCESS (click triangle for details)
Details
:white_check_mark: job output file slurm-10040.out
:white_check_mark: no message matching ERROR:
:white_check_mark: no message matching FAILED:
:white_check_mark: no message matching required modules missing:
:white_check_mark: found message(s) matching No missing installations
:white_check_mark: found message matching .tar.gz created!
Artefacts
eessi-2023.06-software-linux-x86_64-intel-skylake_avx512-1714521918.tar.gzsize: 7238 MiB (7590253500 bytes)
entries: 40202
modules under _2023.06/software/linux/x86_64/intel/skylakeavx512/modules/all
Arrow/14.0.1-gfbf-2023a.lua
arrow-R/14.0.1-foss-2023a-R-4.3.2.lua
RapidJSON/1.1.0-20230928-GCCcore-12.3.0.lua
R-bundle-Bioconductor/3.18-foss-2023a-R-4.3.2.lua
utf8proc/2.8.0-GCCcore-12.3.0.lua
software under _2023.06/software/linux/x86_64/intel/skylakeavx512/software
Arrow/14.0.1-gfbf-2023a
arrow-R/14.0.1-foss-2023a-R-4.3.2
RapidJSON/1.1.0-20230928-GCCcore-12.3.0
R-bundle-Bioconductor/3.18-foss-2023a-R-4.3.2
utf8proc/2.8.0-GCCcore-12.3.0
other under _2023.06/software/linux/x86_64/intel/skylakeavx512
no other files in tarball
May 01 00:30:51 UTC 2024 test result
:grin: SUCCESS (click triangle for details)
ReFrame Summary
[ PASSED ] Ran 9/9 test case(s) from 9 check(s) (0 failure(s), 0 skipped, 0 aborted)
Details
:white_check_mark: job output file slurm-10040.out
:white_check_mark: no message matching ERROR:
:white_check_mark: no message matching [\s*FAILED\s*].*Ran .* test case
May 01 06:41:57 UTC 2024 uploaded transfer of eessi-2023.06-software-linux-x86_64-intel-skylake_avx512-1714521918.tar.gz to S3 bucket succeeded
boegel commented 5 months ago

bot: status

eessi-bot[bot] commented 5 months ago
Updates by the bot instance eessi-bot-mc-aws (click for details) - received bot command `status` from `boegel` - expanded format: `status` - handling command `status` resulted in:
eessi-bot[bot] commented 5 months ago
Updates by the bot instance eessi-bot-mc-azure (click for details) - received bot command `status` from `boegel` - expanded format: `status`
eessi-bot[bot] commented 5 months ago
This is the status of all the bot: build commands: arch result date status url
x86_64-amd-zen3 :cry: FAILURE Apr 05 10:11:17 UTC 2024 finished https://github.com/EESSI/software-layer/pull/533#issuecomment-2039379550
x86_64-amd-zen3 :cry: FAILURE Apr 05 12:42:04 UTC 2024 finished https://github.com/EESSI/software-layer/pull/533#issuecomment-2039517312
aarch64-generic :cry: FAILURE Apr 05 13:11:39 UTC 2024 finished https://github.com/EESSI/software-layer/pull/533#issuecomment-2039638191
aarch64-neoverse_n1 :cry: FAILURE Apr 05 13:11:41 UTC 2024 finished https://github.com/EESSI/software-layer/pull/533#issuecomment-2039638274
aarch64-neoverse_v1 :cry: FAILURE Apr 05 13:03:23 UTC 2024 finished https://github.com/EESSI/software-layer/pull/533#issuecomment-2039638365
x86_64-amd-zen3 :grin: SUCCESS Apr 08 16:32:31 UTC 2024 finished https://github.com/EESSI/software-layer/pull/533#issuecomment-2042549889
aarch64-neoverse_v1 :cry: FAILURE Apr 08 19:09:16 UTC 2024 finished https://github.com/EESSI/software-layer/pull/533#issuecomment-2043392312
aarch64-neoverse_v1 :cry: FAILURE Apr 19 09:04:57 UTC 2024 finished https://github.com/EESSI/software-layer/pull/533#issuecomment-2066093723
aarch64-generic :cry: FAILURE Apr 19 09:04:59 UTC 2024 finished https://github.com/EESSI/software-layer/pull/533#issuecomment-2066093826
aarch64-neoverse_n1 :cry: FAILURE Apr 19 09:02:30 UTC 2024 finished https://github.com/EESSI/software-layer/pull/533#issuecomment-2066093924
aarch64-neoverse_v1 :cry: FAILURE Apr 19 09:10:53 UTC 2024 finished https://github.com/EESSI/software-layer/pull/533#issuecomment-2066094034
x86_64-generic :cry: FAILURE Apr 19 09:13:13 UTC 2024 finished https://github.com/EESSI/software-layer/pull/533#issuecomment-2066094134
x86_64-amd-zen2 :cry: FAILURE Apr 19 10:16:00 UTC 2024 finished https://github.com/EESSI/software-layer/pull/533#issuecomment-2066094256
x86_64-amd-zen3 :cry: FAILURE Apr 19 09:10:55 UTC 2024 finished https://github.com/EESSI/software-layer/pull/533#issuecomment-2066094340
x86_64-intel-haswell :cry: FAILURE Apr 19 09:08:34 UTC 2024 finished https://github.com/EESSI/software-layer/pull/533#issuecomment-2066094483
x86_64-intel-skylake_avx512 :grin: SUCCESS Apr 19 15:06:48 UTC 2024 finished https://github.com/EESSI/software-layer/pull/533#issuecomment-2066225508
aarch64-generic :grin: SUCCESS Apr 19 14:57:56 UTC 2024 finished https://github.com/EESSI/software-layer/pull/533#issuecomment-2066225622
aarch64-neoverse_n1 :grin: SUCCESS Apr 19 13:32:40 UTC 2024 finished https://github.com/EESSI/software-layer/pull/533#issuecomment-2066225714
aarch64-neoverse_v1 :grin: SUCCESS Apr 19 16:02:12 UTC 2024 finished https://github.com/EESSI/software-layer/pull/533#issuecomment-2066225835
x86_64-generic :grin: SUCCESS Apr 19 16:04:15 UTC 2024 finished https://github.com/EESSI/software-layer/pull/533#issuecomment-2066225950
x86_64-amd-zen2 :grin: SUCCESS Apr 19 14:31:49 UTC 2024 finished https://github.com/EESSI/software-layer/pull/533#issuecomment-2066226071
x86_64-amd-zen3 :grin: SUCCESS Apr 19 15:58:00 UTC 2024 finished https://github.com/EESSI/software-layer/pull/533#issuecomment-2066226170
x86_64-intel-haswell :grin: SUCCESS Apr 19 15:07:54 UTC 2024 finished https://github.com/EESSI/software-layer/pull/533#issuecomment-2066226264
x86_64-intel-skylake_avx512 :grin: SUCCESS May 01 00:34:07 UTC 2024 finished https://github.com/EESSI/software-layer/pull/533#issuecomment-2086763057
aarch64-generic :grin: SUCCESS May 01 00:28:37 UTC 2024 finished https://github.com/EESSI/software-layer/pull/533#issuecomment-2086763472
aarch64-neoverse_n1 :grin: SUCCESS Apr 30 23:07:38 UTC 2024 finished https://github.com/EESSI/software-layer/pull/533#issuecomment-2086763879
aarch64-neoverse_v1 :grin: SUCCESS May 01 01:29:32 UTC 2024 finished https://github.com/EESSI/software-layer/pull/533#issuecomment-2086764335
x86_64-generic :grin: SUCCESS May 01 01:35:47 UTC 2024 finished https://github.com/EESSI/software-layer/pull/533#issuecomment-2086764779
x86_64-amd-zen2 :grin: SUCCESS May 01 00:00:25 UTC 2024 finished https://github.com/EESSI/software-layer/pull/533#issuecomment-2086765249
x86_64-amd-zen3 :grin: SUCCESS May 01 01:33:44 UTC 2024 finished https://github.com/EESSI/software-layer/pull/533#issuecomment-2086765692
x86_64-intel-haswell :grin: SUCCESS May 01 00:30:51 UTC 2024 finished https://github.com/EESSI/software-layer/pull/533#issuecomment-2086766125
boegel commented 5 months ago

all staging PRs merged