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EGA-archive / ont2cram

Oxford Nanopore HDF/Fast5 to CRAM conversion tool
Apache License 2.0
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Does EBI ENA accept these CRAMs ? #10

Open colindaven opened 5 years ago

colindaven commented 5 years ago

Hi, interesting project. I wonder if this is sufficiently mature for the EBI to accept these CRAMs ? I have older ONT data (1 read per file) which I would like to convert and submit (with signal).

Using CRAM would potentially save a lot of submission headaches.

Thanks, Colin

a-slide commented 4 years ago

At the moment, the answer is no. But I am working on this with the developers. It should be available very soon

AlexanderVi commented 4 years ago

I have older ONT data (1 read per file)

Small correction here: actually ont2cram does support "old" (single-read) Fast5