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EHDEN / CatalogueExport

Exports the data from the OMOP-CDM that is necessary for the EHDEN Database Catalogue
Apache License 2.0
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validateSchema option causes error #17

Closed larshalvorsen closed 3 years ago

larshalvorsen commented 3 years ago

Describe the bug Setting the parameter validateSchema to TRUE causes an error:

org.postgresql.util.PSQLException: ERROR: column "qualifier_source_value" does not exist
  Position: 5822

Looking at the error log, it expects to find this field in the procedure_occurrence table - there is no such field in this table. errorReportSql.txt

To Reproduce Steps to reproduce the behavior: Set the parameter validateSchema = TRUE in the catalogueExport function call.

PRijnbeek commented 3 years ago

I decided to remove this option.