cschu
commented
5 years ago - ratt ratt wrapper ported to Python improved cleanup
- improvement of code-maintainability (OOP)
- new 3-column annotation-samplesheet allows annotation module (bgann) to be run independent of bgasm-assemblies
- dependencies are served via singularity containers (1 for bgrrl, 1 for qaa)
- module qc has been renamed survey (bgsurvey)
- module finalize has been renamed package (bgpackage)
- annotation module can now be run as part of assembly module
- prokka annotation can now use a custom protein database