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EI-CoreBioinformatics / mikado

Mikado is a lightweight Python3 pipeline whose purpose is to facilitate the identification of expressed loci from RNA-Seq data * and to select the best models in each locus.
https://mikado.readthedocs.io/en/stable/
GNU Lesser General Public License v3.0
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Add ability to handle multiple portcullis junction bed files #47

Closed maplesond closed 8 years ago

maplesond commented 8 years ago

In the mikado pipeline, it might be that we use multiple aligners, in which case we would have portcullis output for each aligner. Those files need to be handled separately in mikado.

lucventurini commented 8 years ago

Present already, multiple files will be loaded sequentially. At the moment it might cause some errors (conflicting names etc.) but the barebone functionality is here. Closing until we verify it might be a source of errors in eg DAGGER.