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EI-CoreBioinformatics / reat

Robust Eukaryotic Annotation Toolkit
https://reat.readthedocs.io/en/latest/
MIT License
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BUG typo affecting exonhints.augustus #25

Closed swarbred closed 2 years ago

swarbred commented 2 years ago

https://github.com/EI-CoreBioinformatics/reat/blob/145559927a8d4d10daf970f8e33f864186002393/annotation/prediction_module/main.wdl#L763

file gets called firstrand.Reverse.exonhints.augustus.gff rather than the correct firststrand.Reverse.exonhints.augustus.gff

this means the file is then not included in the cat to merge the outputs