DPA

[annarerra]

Hello,

When i follow the tutorial, at the step of Differential Phenotype Analysis (DPA), when i run the command :

I get this error: Error in strsplit(c(colnames(data)), "-") : non-character argument even when running your dataset

Thank you in advance :)

[mona-n]

Hello,

Sorry for the late reply. When I run that step, I don't receive any errors:

> dataDEGs <- DPA(dataFilt = dataFilt,
+                 dataType = "Gene expression")
Batch correction skipped since no factors provided
----------------------- DEA -------------------------------
o 10 samples in Cond1type Normal
o 10 samples in Cond2type Tumor
o 13742 features as miRNA or genes 
This may take some minutes...
----------------------- END DEA -------------------------------

Did you use the dataFilt data provided in the package or what data did you use?

Let me know if you need additional help.

[elenapapaleo]

closing this for inactivity