search

ELELAB / mutatex

scripts and facilities for in-silico mutagenesis with FoldX
GNU General Public License v3.0
51 stars 8 forks source link

Make MutateX compatible with latest versions of requirements #183

Open DegnKristine opened 8 months ago

DegnKristine commented 8 months ago

In particular, it would be good to make it compatible with latest Python (3.12) and the latest versions of requirements. Connected to #176 and #184

Deprecation warnings:

MatplotlibDeprecationWarning: The get_cmap function was deprecated in Matplotlib 3.7 and will be removed two minor releases later. Use matplotlib.colormaps[name] or matplotlib.colormaps.get_cmap(obj) instead

Is applicable for:

For ddg2density

Please import gaussian_kde from the scipy.stats namespace; the scipy.stats.kde namespace is deprecated and will be removed in SciPy 2.0.0. from scipy.stats.kde import gaussian_kde