The interesting part is that I am getting this error only in one condition.
To compute the y_timeseries, I need to read nearly 100 GB of data (different .npz files of 3D data (time, lat, lon) ) which is being done in the same code, so there is no such error. But, when I saved the prepared y_timeseries in a separate .npz file (which is about 500 MB) and read this file, I am getting the above mentioned error. I do not understand why reading such a small file gets an error while reading large data sets there is no error.
Hello,
I am using a two time series to compute transfer entropy using the below lines.
pyinform.transferentropy.transfer_entropy(x_timeseries,y_timeseries,1)
But I am getting a segmentation fault in Linux and tcmalloc (in collab) when interchanging the time series (y to x) using the below line.
pyinform.transferentropy.transfer_entropy(y_timeseries,x_timeseries,1)
The interesting part is that I am getting this error only in one condition.
To compute the y_timeseries, I need to read nearly 100 GB of data (different .npz files of 3D data
(time, lat, lon)
) which is being done in the same code, so there is no such error. But, when I saved the prepared y_timeseries in a separate .npz file (which is about 500 MB) and read this file, I am getting the above mentioned error. I do not understand why reading such a small file gets an error while reading large data sets there is no error.Please, someone help me in this regard.
Thanks