Open mijiandui opened 7 months ago
Traceback (most recent call last): File "/home/longrj/miniconda3/envs/BASALT/bin/BASALT", line 141, in BASALT_main_c(assembly_list, datasets, num_threads, lr_list, hifi_list, hic_list, eb_list, ram, continue_mode, functional_module, autobining_parameters, refinement_paramter, max_ctn, min_cpn, pwd, QC_software) File "/home/longrj/miniconda3/envs/BASALT/bin/BASALT_main_c.py", line 611, in BASALT_main_c re_assembly_main(binset_folder, datasets_list, lr_list, hybri_reassembly, ram, num_threads) File "/home/longrj/miniconda3/envs/BASALT/bin/S9_Reassembly_checkm.py", line 537, in re_assembly_main reassembly(bin_seq2, binset_folder+'_re-assembly_binset', num_threads, binset_folder+'_sr_bins_seq', long_read, ram, pwd) File "/home/longrj/miniconda3/envs/BASALT/bin/S9_Reassembly_checkm.py", line 325, in reassembly if seq_len <= 125: UnboundLocalError: local variable 'seq_len' referenced before assignment
the error as above. 请您帮我看看是为啥呢，谢谢。
Traceback (most recent call last): File "/home/longrj/miniconda3/envs/BASALT/bin/BASALT", line 141, in
BASALT_main_c(assembly_list, datasets, num_threads, lr_list, hifi_list, hic_list, eb_list, ram, continue_mode, functional_module, autobining_parameters, refinement_paramter, max_ctn, min_cpn, pwd, QC_software)
File "/home/longrj/miniconda3/envs/BASALT/bin/BASALT_main_c.py", line 611, in BASALT_main_c
re_assembly_main(binset_folder, datasets_list, lr_list, hybri_reassembly, ram, num_threads)
File "/home/longrj/miniconda3/envs/BASALT/bin/S9_Reassembly_checkm.py", line 537, in re_assembly_main
reassembly(bin_seq2, binset_folder+'_re-assembly_binset', num_threads, binset_folder+'_sr_bins_seq', long_read, ram, pwd)
File "/home/longrj/miniconda3/envs/BASALT/bin/S9_Reassembly_checkm.py", line 325, in reassembly
if seq_len <= 125:
UnboundLocalError: local variable 'seq_len' referenced before assignment
the error as above. 请您帮我看看是为啥呢，谢谢。